Balancing our gut microbes can help our health

Food, medicine and stress can throw our gut bugs out of whack — a condition called dysbiosis.

  • Wednesday, July 27, 2022 1:30am
  • Life

By Christine Bowen / Special to The Herald

When our gut bugs are healthy and balanced, we are more likely to experience health in multiple other ways.

For the purpose of this article, I use the slang term “bugs,” but I am referring to mostly yeast, bacteria, and archaea — not actual bugs. The number of organisms in our intestines is estimated to be in the trillions, so the health and balance of these populations are vital to our health. Some of our gut bugs are deemed beneficial, others may be harmful and some can even be opportunistic. This mix of organisms with different actions is constantly shifting and changing. Often this is a good thing, but when the organisms shift and change in ways that can be harmful to our health, that’s what we call dysbiosis.

The foods we eat, the people and animals we contact, our stress levels and the medicines that we take are only some of the things that influence the diversity of our gut bugs. Dysbiosis can cause a negative domino effect of gut lining injury, increased inflammation, leaky gut, and can disrupt our immune system (remember, 70% of the body’s immune system is in the gut). These negative impacts can lead to other medical conditions starting or worsening.

There are two main types of dysbiosis. One is when our helpful bugs get depleted, and the other type is when potentially harmful organisms can overgrow and create problems from being overabundant. Whether too high or too low of colony counts, the impacts of our gut organisms can lead to poor health or chronic disease.

Some examples of medical conditions that can develop if dysbiosis isn’t identified or treated are autism (among many other factors), autoimmune diseases, inflammatory bowel disease (IBD), IBS, colon cancer, diabetes, asthma, allergies, mood imbalance and more.

What causes dysbiosis?

Medications: Antibiotics, proton pump inhibitors, metformin, NSAIDs (non-steroidal anti-inflammatory drugs), opioids, antipsychotics, laxatives, and oral steroids are some of the most common medications that contribute to dysbiosis.

Alcohol: Drinking two or more alcoholic beverages per day can deplete our gut health.

Chronic stress/anger: This is the single largest cause of changes in our gut microbes.

Poor sleep: Studies show that sleep disruption puts undue stress on the body and can negatively impact our gut health

Food: High protein, high fat, high sugar, low fiber, food chemicals such as additives and preservatives, lingering pesticides on produce, and food allergies/intolerances all increase dysbiosis.

No or low movement: Moving our bodies helps the microbiome stay in balance.

Infections: Current or past infections can have lasting impacts on the health of our gut microbes. Infections can even become chronic and continue to infect humans longer term if not detected and eradicated.

Overgrowth conditions: Potentially harmful organisms or even normal organisms can overgrow and create problems. The three common types of overgrowth conditions are small intestine bacterial overgrowth (SIBO, see my previous article on this at tinyurl.com/EDH-SIBA), intestinal methanogen overgrowth (IMO) and yeast overgrowth. Get tested for these conditions if you have gas, bloating, digestive changes, joint pain, brain fog, fatigue or rashes.

Steps for recovering from dysbiosis

Identify the level of dysbiosis, infections, or overgrowths in your gut using tests like stool testing to identify the organisms, urine tests to detect waste products from dysbiosis, or breath testing to look for archaea or bacterial overgrowth (IMO or SIBO) or stool, or blood testing to look for yeast overgrowth.

Remove/rebalance

Nutritional changes: Specific nutritional changes may need to be made when working on shifting the gut bugs in a healthier direction. This may include identifying food allergies/intolerances.

Herbs or other more natural treatments targeted at removing harmful organisms are a good step for starting a plan for recovering from dysbiosis.

Restore the health of your microbiome

Once you have treated the gut imbalance, focus on rebuilding healthy gut bug colonies.

Eat more plants: Our gut bugs and intestinal cells really like fiber, especially from fruit and vegetables.

Eat more cultured/fermented foods: These foods are rich in probiotics (good or helpful bacteria. Food like yogurt (plain), kimchi, sauerkraut, pickles, kombucha, etc., can help with keeping a rich diversity of healthy gut bacteria.

Repair the intestinal lining with treatments like probiotics, glutamine, zinc carnosine, and herbs and nutrients that help to heal the gut.

Sleep: Improving our sleep can help with improving our gut health. Try going to bed an hour earlier, don’t look at your devices in bed, and try to wind down for sleep an hour before you need to be asleep. If you suspect that you have sleep apnea, get tested by a pulmonologist (lung/breathing doctor).

Peace: Since anger and stress make the single biggest shift in our gut bugs, this seems like a great place to find some helpful tools to manage stress. Walk barefoot in the grass. Stare at a lit candle and try to clear your mind. Talking to someone when you are having really high stress (friends, counselors, hotlines) can all be ways to help us navigate the stressful times in our lives. Consider calling 211 if you need help with resources.

Movement: Therapeutic movement does not have to mean exercising at a gym for an hour a day. Take the stairs an extra time (if that is possible for you), punch your fists in the air, and move in any way that feels good to you. Be in your body. Turn on your favorite music and move.

If you feel like your gut is out of balance or even if you have developed conditions like the ones mentioned above that can be connected to dysbiosis, please get help! It is very important to work with a knowledgeable digestive health provider who can help you get the testing and the treatments that you need and that are specific to the organisms that are overgrown or depleted in your gut, specifically. The right balance of helpful organisms can prevent the development or worsening of other medical conditions.

Dr. Christine Bowen of Everett is a licensed naturopathic doctor, keynote speaker, and author. In practice since 2005, Bowen specializes in holistic approaches for digestive health, autoimmunity, and complex cases. Go to www.bothellnaturalhealth.com for more information. Connect with her via Facebook drchristinebowen or Instagram @drchristinebowen.

Talk to us

> Give us your news tips.

> Send us a letter to the editor.

> More Herald contact information.

More in Life

Silas Machin, 13, uses a hand saw to make a space for a fret to be placed during class on Oct. 7, 2025 in Lake Stevens, Washington. (Olivia Vanni / The Herald)
Kids at play: Lake Stevens middle-schoolers craft electric guitars

Since 2012 students in Alex Moll’s afterschool club have built 100s of custom and classic guitars.

Queensryche, Halloween story time, glass art and more

Music, arts and more coming to Snohomish County

Join Snohomish PUD in preparing for storm season

October is here and the weather has already displayed its ability to… Continue reading

Absolute Zero Earthstar Bromeliad was discovered in a crypt! Its foliage is black with ghostly white striping with sharp edges – be careful! (Provided photo)
The Halloweeniest plants around

This magical month of October is coming to a close, accompanied everywhere… Continue reading

These crispy, cheesy chorizo and potato tacos are baked in the oven to achieve an extra crunch. (Post-Gazette)
Crispy oven chorizo and potato tacos are social media darlings

I’m not alone when I say I could eat tacos every day… Continue reading

Marysville Pilchuck High School mural artists Monie Ordonia, left, and Doug Salinas, right, in front of their mural on the high school campus on Oct. 14, 2025 in Marysville, Washington. (Olivia Vanni / The Herald)
Tulalip artists unveil mural at Marysville Pilchuck High School

Monie Ordonia hopes her depictions of Mount Pilchuck and Pilchuck Julia bring blessings and community.

Grandpa Buzz smiles while he crosses the street and greets people along the way as he walks to Cascade View Elementary on Sept. 30, 2025 in Snohomish, Washington. (Olivia Vanni / The Herald)
‘Everybody wants a Grandpa Buzz’

Buzz Upton, 88, drives 40 minutes from Stanwood to spread joy and walk kids to school in Snohomish.

Escalade IQ photo provided by Cadillac Newsroom USA
2026 Cadillac Escalade IQ Premium Sport

Unsurpassed Luxury All-Electric Full-Sized SUV

Snohomish Conservation District will host the eighth annual Orca Recovery Day

Help out planting native species in Ovenell Park in Stanwood on Saturday.

Logo for news use featuring the municipality of Snohomish in Snohomish County, Washington. 220118
Join Green Snohomish on a walking fall tree tour

On Saturday, learn about the city’s heritage trees on a 2-mile walking tour.

Sebastian Sanchez, left, instructor Hannah Dreesbach, center, and Kash Willis, right, learn how to identify trees near Darrington Elementary School in Darrington, Washington on Friday, Feb. 17, 2023. Environmental and outdoor education lessons are woven throughout the in-school and after-school activities in this small community, thanks to the Glacier Peak Institute. The non-profit arose from community concerns in the wake of the Oso landslide disaster. (Annie Barker / The Herald)
Glacier Peak Institute will host a fundraiser in Everett on Thursday

The institute engages rural youth with science, technology, recreation, engineering, art, mathematics and skill-building programs.

Paperbark-type maples have unique foliage, different than what you think of as maple. They boast electric red-orange fall foliage and peeling coppery-tan bar, which adds some serious winter interest. (Schmidt Nursery)
The trilogy of trees continues…

Fall is in full swing and as promised, I am going to… Continue reading

Support local journalism

If you value local news, make a gift now to support the trusted journalism you get in The Daily Herald. Donations processed in this system are not tax deductible.